Getting error while trying to start the Dhis2.33 web app in Tomcat

Monjur · 18 February 2021 04:51

Hello,
I’ve installed Postgresql 13, Tomcat 9, and followed the standard procedure to configure DHIS2 in my MacBook pro. I have put the DHIS2.33 WAR in webapp folder of the Tomcat and getting the below errors:

INFO 2021-02-18 09:58:22,259 System property dhis2.home not set (DefaultLocationManager.java [http-nio-8080-exec-2])

INFO 2021-02-18 09:58:22,264 Environment variable DHIS2_HOME points to /users/monjur/dhis/config (DefaultLocationManager.java [http-nio-8080-exec-2])
INFO 2021-02-18 09:58:22,292 File /users/monjur/dhis/config/dhis-google-auth.json does not exist (DefaultLocationManager.java [http-nio-8080-exec-2])
INFO 2021-02-18 09:58:22,293 Could not find dhis-google-auth.json (DefaultDhisConfigurationProvider.java [http-nio-8080-exec-2])
INFO 2021-02-18 09:58:28,376 System property dhis2.home not set (DefaultLocationManager.java [http-nio-8080-exec-2])
INFO 2021-02-18 09:58:28,377 Environment variable DHIS2_HOME points to /users/monjur/dhis/config (DefaultLocationManager.java [http-nio-8080-exec-2])
INFO 2021-02-18 09:58:28,377 File /users/monjur/dhis/config/dhis-google-auth.json does not exist (DefaultLocationManager.java [http-nio-8080-exec-2])
WARN 2021-02-18 12:57:48,623 Exception encountered during context initialization - cancelling refresh attempt: org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name ‘org.springframework.scheduling.annotation.ProxyAsyncConfiguration’: Unsatisfied dependency expressed through method ‘setConfigurers’ parameter 0; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name ‘databaseInfo’ defined in URL [jar:file:/usr/local/apache-tomcat-9.0.43/webapps/dhis233/WEB-INF/lib/dhis-support-system-2.33.8.jar!/org/hisp/dhis/system/database/DatabaseInfoFactoryBean.class]: Unsatisfied dependency expressed through constructor parameter 0; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name ‘databaseInfoProvider’ defined in URL [jar:file:/usr/local/apache-tomcat-9.0.43/webapps/dhis233/WEB-INF/lib/dhis-support-system-2.33.8.jar!/org/hisp/dhis/system/database/HibernateDatabaseInfoProvider.class]: Unsatisfied dependency expressed through constructor parameter 1; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘jdbcTemplate’ defined in org.hisp.dhis.config.HibernateConfig: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.jdbc.core.JdbcTemplate]: Factory method ‘jdbcTemplate’ threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘dataSource’ defined in org.hisp.dhis.config.HibernateConfig: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [javax.sql.DataSource]: Factory method ‘dataSource’ threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘hibernateConfigurationProvider’: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javax/xml/bind/JAXBException (AbstractApplicationContext.java [main])
ERROR 2021-02-18 09:58:30,539 Context initialization failed (ContextLoader.java [http-nio-8080-exec-2])

org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name ‘org.springframework.scheduling.annotation.ProxyAsyncConfiguration’: Unsatisfied dependency expressed through method ‘setConfigurers’ parameter 0; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name ‘databaseInfo’ defined in URL [jar:file:/usr/local/apache-tomcat-9.0.43/webapps/dhis233/WEB-INF/lib/dhis-support-system-2.33.8.jar!/org/hisp/dhis/system/database/DatabaseInfoFactoryBean.class]: Unsatisfied dependency expressed through constructor parameter 0; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name ‘databaseInfoProvider’ defined in URL [jar:file:/usr/local/apache-tomcat-9.0.43/webapps/dhis233/WEB-INF/lib/dhis-support-system-2.33.8.jar!/org/hisp/dhis/system/database/HibernateDatabaseInfoProvider.class]: Unsatisfied dependency expressed through constructor parameter 1; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘jdbcTemplate’ defined in org.hisp.dhis.config.HibernateConfig: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.jdbc.core.JdbcTemplate]: Factory method ‘jdbcTemplate’ threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘dataSource’ defined in org.hisp.dhis.config.HibernateConfig: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [javax.sql.DataSource]: Factory method ‘dataSource’ threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘hibernateConfigurationProvider’: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javax/xml/bind/JAXBException

at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredMethodElement.inject(AutowiredAnnotationBeanPostProcessor.java:676)

at org.springframework.beans.factory.annotation.InjectionMetadata.inject(InjectionMetadata.java:90)

at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor.postProcessProperties(AutowiredAnnotationBeanPostProcessor.java:374)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1411)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:592)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:515)

at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:320)

at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)

at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:318)

at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:199)

at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:392)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:1321)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1160)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:555)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:515)

at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:320)

at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)

at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:318)

at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:204)

at org.springframework.context.support.PostProcessorRegistrationDelegate.registerBeanPostProcessors(PostProcessorRegistrationDelegate.java:228)

at org.springframework.context.support.AbstractApplicationContext.registerBeanPostProcessors(AbstractApplicationContext.java:721)

at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:534)

at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:400)

at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:291)

at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:103)

at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4716)

at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5177)

at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)

at org.apache.catalina.manager.ManagerServlet.start(ManagerServlet.java:1423)

at org.apache.catalina.manager.HTMLManagerServlet.start(HTMLManagerServlet.java:704)

at org.apache.catalina.manager.HTMLManagerServlet.doPost(HTMLManagerServlet.java:223)

at javax.servlet.http.HttpServlet.service(HttpServlet.java:652)

at javax.servlet.http.HttpServlet.service(HttpServlet.java:733)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:227)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162)

at org.apache.catalina.filters.CsrfPreventionFilter.doFilter(CsrfPreventionFilter.java:211)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162)

at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162)

at org.apache.catalina.filters.HttpHeaderSecurityFilter.doFilter(HttpHeaderSecurityFilter.java:126)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162)

at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:202)

at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:97)

at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:667)

at org.apache.catalina.valves.RequestFilterValve.process(RequestFilterValve.java:378)

at org.apache.catalina.valves.RemoteAddrValve.invoke(RemoteAddrValve.java:56)

at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:143)

at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:92)

at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:687)

at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:78)

at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:346)

at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:374)

at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:65)

at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:887)

at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1684)

at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49)

at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1130)

at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:630)

at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)

at java.base/java.lang.Thread.run(Thread.java:832)

Caused by: org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name ‘databaseInfo’ defined in URL [jar:file:/usr/local/apache-tomcat-9.0.43/webapps/dhis233/WEB-INF/lib/dhis-support-system-2.33.8.jar!/org/hisp/dhis/system/database/DatabaseInfoFactoryBean.class]: Unsatisfied dependency expressed through constructor parameter 0; nested exception is org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name ‘databaseInfoProvider’ defined in URL [jar:file:/usr/local/apache-tomcat-9.0.43/webapps/dhis233/WEB-INF/lib/dhis-support-system-2.33.8.jar!/org/hisp/dhis/system/database/HibernateDatabaseInfoProvider.class]: Unsatisfied dependency expressed through constructor parameter 1; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘jdbcTemplate’ defined in org.hisp.dhis.config.HibernateConfig: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.jdbc.core.JdbcTemplate]: Factory method ‘jdbcTemplate’ threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘dataSource’ defined in org.hisp.dhis.config.HibernateConfig: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [javax.sql.DataSource]: Factory method ‘dataSource’ threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘hibernateConfigurationProvider’: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javax/xml/bind/JAXBException

at org.springframework.beans.factory.support.ConstructorResolver.createArgumentArray(ConstructorResolver.java:769)

at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:218)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:1341)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:1187)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.getSingletonFactoryBeanForTypeCheck(AbstractAutowireCapableBeanFactory.java:991)

at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.getTypeForFactoryBean(AbstractAutowireCapableBeanFactory.java:865)

at org.springframework.beans.factory.support.AbstractBeanFactory.isTypeMatch(AbstractBeanFactory.java:574)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.doGetBeanNamesForType(DefaultListableBeanFactory.java:518)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.getBeanNamesForType(DefaultListableBeanFactory.java:481)

at org.springframework.beans.factory.BeanFactoryUtils.beanNamesForTypeIncludingAncestors(BeanFactoryUtils.java:227)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.findAutowireCandidates(DefaultListableBeanFactory.java:1415)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveMultipleBeans(DefaultListableBeanFactory.java:1322)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.doResolveDependency(DefaultListableBeanFactory.java:1209)

at org.springframework.beans.factory.support.DefaultListableBeanFactory.resolveDependency(DefaultListableBeanFactory.java:1171)

at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredMethodElement.inject(AutowiredAnnotationBeanPostProcessor.java:668)

… 62 more

Caused by: org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name ‘databaseInfoProvider’ defined in URL [jar:file:/usr/local/apache-tomcat-9.0.43/webapps/dhis233/WEB-INF/lib/dhis-support-system-2.33.8.jar!/org/hisp/dhis/system/database/HibernateDatabaseInfoProvider.class]: Unsatisfied dependency expressed through constructor parameter 1; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘jdbcTemplate’ defined in org.hisp.dhis.config.HibernateConfig: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [org.springframework.jdbc.core.JdbcTemplate]: Factory method ‘jdbcTemplate’ threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘dataSource’ defined in org.hisp.dhis.config.HibernateConfig: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [javax.sql.DataSource]: Factory method ‘dataSource’ threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name ‘hibernateConfigurationProvider’: Invocation of init method failed; nested exception is java.lang.NoClassDefFoundError: javax/xml/bind/JAXBException