DHIS-Live not working with Linux

Support - Assistance technique
1

Hi Devs,

I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am unable to run it, when i am running startup.sh it is saying
trap: ERR: bad trap
/home/dhis-live/startup.sh: 7: Syntax error: “(” unexpected

Downloaded it from http://www.dhis2.org/downloads

Tried it on windows and it worked fine.
Does DHIS-Live work with Linux also or it works with windows only?

···

–
Thanks,
Neeraj Gupta

2

Hi Neeraj,

can you post the contents of the startup.sh script?

Lars

···

On Fri, Feb 1, 2013 at 11:26 AM, Neeraj Gupta neeraj.hisp@gmail.com wrote:

Hi Devs,

I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am unable to run it, when i am running startup.sh it is saying

trap: ERR: bad trap
/home/dhis-live/startup.sh: 7: Syntax error: “(” unexpected

Downloaded it from http://www.dhis2.org/downloads

Tried it on windows and it worked fine.
Does DHIS-Live work with Linux also or it works with windows only?

–
Thanks,
Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

3

Lars,

Below is the content of startup.sh

**#!/bin/bash

get ready to catch errors

trap ctrl-c INT
trap unexpected-exit ERR

function ctrl-c () {
echo
echo “============================================”

echo "Keyboard interrupt"
echo "DHIS2 live exited"
echo "============================================"
exit

}

function unexpected-exit () {
echo “============================================”

echo "DHIS2 live exited with an error"
echo "Make sure you have a java runtime in your path"
echo "============================================"
read -p "Press any key to exit"

}

echo “Starting DHIS2 live …”

java -jar dhis2-live.jar

DHIS2LIVE=dirname $0
#$JAVA_HOME/bin/
java -jar $DHIS2LIVE/dhis2-live.jar
echo “DHIS2 live exited normally”**

···

On Fri, Feb 1, 2013 at 3:14 PM, Lars Helge Øverland larshelge@gmail.com wrote:

Hi Neeraj,

can you post the contents of the startup.sh script?

Lars

On Fri, Feb 1, 2013 at 11:26 AM, Neeraj Gupta neeraj.hisp@gmail.com wrote:

Hi Devs,

I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am unable to run it, when i am running startup.sh it is saying

trap: ERR: bad trap
/home/dhis-live/startup.sh: 7: Syntax error: “(” unexpected

Downloaded it from http://www.dhis2.org/downloads

Tried it on windows and it worked fine.
Does DHIS-Live work with Linux also or it works with windows only?

–
Thanks,
Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

–
Thanks,
Neeraj Gupta

4

Hi Neeraj

This strange error seems to indicate you don't have a bash shell which
is odd, or if you do its not being used.

I see the error when I type 'sh startup.sh'.

But when I explicitly type 'bash startup.sh' all is fine. Or even
just './startup.sh'

Can you confirm how you are starting this script? Maybe you have a
shortcut which explicitly calls 'sh'.

Also I would not suggest that dhis-live is the best option for running
on ubuntu server if this is meant to be for production use. It uses a
pre-canned set of JAVA_OPTS which you would more likely want to tune
to your environment.

Bob

···

On 1 February 2013 10:01, Neeraj Gupta <neeraj.hisp@gmail.com> wrote:

Lars,

Below is the content of startup.sh

#!/bin/bash

# get ready to catch errors
trap ctrl-c INT
trap unexpected-exit ERR

function ctrl-c () {
    echo
    echo "============================================"
    echo "Keyboard interrupt"
    echo "DHIS2 live exited"
    echo "============================================"
    exit
}

function unexpected-exit () {
    echo "============================================"
    echo "DHIS2 live exited with an error"
    echo "Make sure you have a java runtime in your path"
    echo "============================================"
    read -p "Press any key to exit"
}

echo "Starting DHIS2 live ..."
# java -jar dhis2-live.jar
DHIS2LIVE=`dirname $0`
#$JAVA_HOME/bin/
java -jar $DHIS2LIVE/dhis2-live.jar
echo "DHIS2 live exited normally"

On Fri, Feb 1, 2013 at 3:14 PM, Lars Helge Øverland <larshelge@gmail.com> > wrote:

Hi Neeraj,

can you post the contents of the startup.sh script?

Lars

On Fri, Feb 1, 2013 at 11:26 AM, Neeraj Gupta <neeraj.hisp@gmail.com> >> wrote:

Hi Devs,

I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am
unable to run it, when i am running startup.sh it is saying
trap: ERR: bad trap
/home/dhis-live/startup.sh: 7: Syntax error: "(" unexpected

Downloaded it from Downloads - DHIS2

Tried it on windows and it worked fine.
Does DHIS-Live work with Linux also or it works with windows only?

--
Thanks,
Neeraj Gupta

_______________________________________________
Mailing list: DHIS 2 developers in Launchpad
Post to : dhis2-devs@lists.launchpad.net
Unsubscribe : DHIS 2 developers in Launchpad
More help : ListHelp - Launchpad Help

--
Thanks,
Neeraj Gupta

_______________________________________________
Mailing list: DHIS 2 developers in Launchpad
Post to : dhis2-devs@lists.launchpad.net
Unsubscribe : DHIS 2 developers in Launchpad
More help : ListHelp - Launchpad Help

5

I would suggest to make the first line to call sh:

#!/bin/sh

This I believe is more portable compared to expecting bash. Not that bash isn’t available, but still chances are that might be unavailable in other systems

···

Regards,
Saptarshi PURKAYASTHA

My Tech Blog: http://sunnytalkstech.blogspot.com
You Live by CHOICE, Not by CHANCE

On 1 February 2013 11:11, Bob Jolliffe bobjolliffe@gmail.com wrote:

Hi Neeraj

This strange error seems to indicate you don’t have a bash shell which

is odd, or if you do its not being used.

I see the error when I type ‘sh startup.sh’.

But when I explicitly type ‘bash startup.sh’ all is fine. Or even

just ‘./startup.sh’

Can you confirm how you are starting this script? Maybe you have a

shortcut which explicitly calls ‘sh’.

Also I would not suggest that dhis-live is the best option for running

on ubuntu server if this is meant to be for production use. It uses a

pre-canned set of JAVA_OPTS which you would more likely want to tune

to your environment.

Bob

On 1 February 2013 10:01, Neeraj Gupta neeraj.hisp@gmail.com wrote:

Lars,

Below is the content of startup.sh

#!/bin/bash

get ready to catch errors

trap ctrl-c INT

trap unexpected-exit ERR

function ctrl-c () {

echo

echo "============================================"

echo "Keyboard interrupt"

echo "DHIS2 live exited"

echo "============================================"

exit

}

function unexpected-exit () {

echo "============================================"

echo "DHIS2 live exited with an error"

echo "Make sure you have a java runtime in your path"

echo "============================================"

read -p "Press any key to exit"

}

echo “Starting DHIS2 live …”

java -jar dhis2-live.jar

DHIS2LIVE=dirname $0

#$JAVA_HOME/bin/

java -jar $DHIS2LIVE/dhis2-live.jar

echo “DHIS2 live exited normally”

On Fri, Feb 1, 2013 at 3:14 PM, Lars Helge Øverland larshelge@gmail.com > > > wrote:

Hi Neeraj,

can you post the contents of the startup.sh script?

Lars

On Fri, Feb 1, 2013 at 11:26 AM, Neeraj Gupta neeraj.hisp@gmail.com > > >> wrote:

Hi Devs,

I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am

unable to run it, when i am running startup.sh it is saying

trap: ERR: bad trap

/home/dhis-live/startup.sh: 7: Syntax error: “(” unexpected

Downloaded it from http://www.dhis2.org/downloads

Tried it on windows and it worked fine.

Does DHIS-Live work with Linux also or it works with windows only?

–

Thanks,

Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

–

Thanks,

Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

6

oops, my bad.

This is a bash script with function calls. You’ll need to work with it.

You’ll need to verify that the first line is indeed

#!/bin/bash

and the file has executable permissions

···

Regards,
Saptarshi PURKAYASTHA

My Tech Blog: http://sunnytalkstech.blogspot.com

You Live by CHOICE, Not by CHANCE

On 1 February 2013 11:11, Bob Jolliffe bobjolliffe@gmail.com wrote:

Hi Neeraj

This strange error seems to indicate you don’t have a bash shell which

is odd, or if you do its not being used.

I see the error when I type ‘sh startup.sh’.

But when I explicitly type ‘bash startup.sh’ all is fine. Or even

just ‘./startup.sh’

Can you confirm how you are starting this script? Maybe you have a

shortcut which explicitly calls ‘sh’.

Also I would not suggest that dhis-live is the best option for running

on ubuntu server if this is meant to be for production use. It uses a

pre-canned set of JAVA_OPTS which you would more likely want to tune

to your environment.

Bob

On 1 February 2013 10:01, Neeraj Gupta neeraj.hisp@gmail.com wrote:

Lars,

Below is the content of startup.sh

#!/bin/bash

get ready to catch errors

trap ctrl-c INT

trap unexpected-exit ERR

function ctrl-c () {

echo

echo "============================================"

echo "Keyboard interrupt"

echo "DHIS2 live exited"

echo "============================================"

exit

}

function unexpected-exit () {

echo "============================================"

echo "DHIS2 live exited with an error"

echo "Make sure you have a java runtime in your path"

echo "============================================"

read -p "Press any key to exit"

}

echo “Starting DHIS2 live …”

java -jar dhis2-live.jar

DHIS2LIVE=dirname $0

#$JAVA_HOME/bin/

java -jar $DHIS2LIVE/dhis2-live.jar

echo “DHIS2 live exited normally”

On Fri, Feb 1, 2013 at 3:14 PM, Lars Helge Øverland larshelge@gmail.com > > > wrote:

Hi Neeraj,

can you post the contents of the startup.sh script?

Lars

On Fri, Feb 1, 2013 at 11:26 AM, Neeraj Gupta neeraj.hisp@gmail.com > > >> wrote:

Hi Devs,

I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am

unable to run it, when i am running startup.sh it is saying

trap: ERR: bad trap

/home/dhis-live/startup.sh: 7: Syntax error: “(” unexpected

Downloaded it from http://www.dhis2.org/downloads

Tried it on windows and it worked fine.

Does DHIS-Live work with Linux also or it works with windows only?

–

Thanks,

Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

–

Thanks,

Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

7

oops, my bad.
This is a bash script with function calls. You'll need to work with it.

Exactly. Or just delete
# get ready to catch errors
and
echo "Starting DHIS2 live ..."

Trapping ctrl-c is only really interesting from command line anyway.

You'll need to verify that the first line is indeed
#!/bin/bash
and the file has executable permissions

I think he must be executing it somehow like 'sh startup.sh' which is
maybe default on gui deskop shortcuts. This can probably be changed
when creating the shortcut.

···

On 1 February 2013 11:31, Saptarshi Purkayastha <sunbiz@gmail.com> wrote:

---
Regards,
Saptarshi PURKAYASTHA

My Tech Blog: http://sunnytalkstech.blogspot.com
You Live by CHOICE, Not by CHANCE

On 1 February 2013 11:11, Bob Jolliffe <bobjolliffe@gmail.com> wrote:

Hi Neeraj

This strange error seems to indicate you don't have a bash shell which
is odd, or if you do its not being used.

I see the error when I type 'sh startup.sh'.

But when I explicitly type 'bash startup.sh' all is fine. Or even
just './startup.sh'

Can you confirm how you are starting this script? Maybe you have a
shortcut which explicitly calls 'sh'.

Also I would not suggest that dhis-live is the best option for running
on ubuntu server if this is meant to be for production use. It uses a
pre-canned set of JAVA_OPTS which you would more likely want to tune
to your environment.

Bob

On 1 February 2013 10:01, Neeraj Gupta <neeraj.hisp@gmail.com> wrote:
> Lars,
>
> Below is the content of startup.sh
>
> #!/bin/bash
>
> # get ready to catch errors
> trap ctrl-c INT
> trap unexpected-exit ERR
>
> function ctrl-c () {
> echo
> echo "============================================"
> echo "Keyboard interrupt"
> echo "DHIS2 live exited"
> echo "============================================"
> exit
> }
>
> function unexpected-exit () {
> echo "============================================"
> echo "DHIS2 live exited with an error"
> echo "Make sure you have a java runtime in your path"
> echo "============================================"
> read -p "Press any key to exit"
> }
>
> echo "Starting DHIS2 live ..."
> # java -jar dhis2-live.jar
> DHIS2LIVE=`dirname $0`
> #$JAVA_HOME/bin/
> java -jar $DHIS2LIVE/dhis2-live.jar
> echo "DHIS2 live exited normally"
>
>
>
> On Fri, Feb 1, 2013 at 3:14 PM, Lars Helge Øverland >> > <larshelge@gmail.com> >> > wrote:
>>
>> Hi Neeraj,
>>
>> can you post the contents of the startup.sh script?
>>
>> Lars
>>
>>
>> On Fri, Feb 1, 2013 at 11:26 AM, Neeraj Gupta <neeraj.hisp@gmail.com> >> >> wrote:
>>>
>>> Hi Devs,
>>>
>>> I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am
>>> unable to run it, when i am running startup.sh it is saying
>>> trap: ERR: bad trap
>>> /home/dhis-live/startup.sh: 7: Syntax error: "(" unexpected
>>>
>>> Downloaded it from Downloads - DHIS2
>>>
>>> Tried it on windows and it worked fine.
>>> Does DHIS-Live work with Linux also or it works with windows only?
>>>
>>>
>>>
>>> --
>>> Thanks,
>>> Neeraj Gupta
>>>
>>> _______________________________________________
>>> Mailing list: DHIS 2 developers in Launchpad
>>> Post to : dhis2-devs@lists.launchpad.net
>>> Unsubscribe : DHIS 2 developers in Launchpad
>>> More help : ListHelp - Launchpad Help
>>>
>>
>
>
>
> --
> Thanks,
> Neeraj Gupta
>
> _______________________________________________
> Mailing list: DHIS 2 developers in Launchpad
> Post to : dhis2-devs@lists.launchpad.net
> Unsubscribe : DHIS 2 developers in Launchpad
> More help : ListHelp - Launchpad Help
>

_______________________________________________
Mailing list: DHIS 2 developers in Launchpad
Post to : dhis2-devs@lists.launchpad.net
Unsubscribe : DHIS 2 developers in Launchpad
More help : ListHelp - Launchpad Help

_______________________________________________
Mailing list: DHIS 2 developers in Launchpad
Post to : dhis2-devs@lists.launchpad.net
Unsubscribe : DHIS 2 developers in Launchpad
More help : ListHelp - Launchpad Help

8

I tried both sh and bash startup.sh and tried to run through jetty. It starts to run and all startup routines executed successfully but i am getting outofmemory error.

Below is the HEAP configuration in the computer

Heap Configuration:
MinHeapFreeRatio = 40
MaxHeapFreeRatio = 70
MaxHeapSize = 1029701632 (982.0MB)
NewSize = 1310720 (1.25MB)
MaxNewSize = 17592186044415 MB
OldSize = 5439488 (5.1875MB)

NewRatio = 2
SurvivorRatio = 8
PermSize = 21757952 (20.75MB)
MaxPermSize = 85983232 (82.0MB)
G1HeapRegionSize = 0 (0.0MB)

Heap Usage:
PS Young Generation
Eden Space:

capacity = 294912000 (281.25MB)
used = 951720 (0.9076309204101562MB)
free = 293960280 (280.34236907958984MB)
0.3227132161458333% used
From Space:
capacity = 65536 (0.0625MB)
used = 0 (0.0MB)

free = 65536 (0.0625MB)
0.0% used
To Space:
capacity = 6291456 (6.0MB)
used = 0 (0.0MB)
free = 6291456 (6.0MB)
0.0% used
PS Old Generation
capacity = 686489600 (654.6875MB)

used = 155520152 (148.3155746459961MB)
free = 530969448 (506.3719253540039MB)
22.65440758315931% used
PS Perm Generation
capacity = 85983232 (82.0MB)
used = 85983216 (81.99998474121094MB)

free = 16 (1.52587890625E-5MB)
99.99998139172065% used

32964 interned Strings occupying 3779232 bytes. And using following variables

export JAVA_HOME=/usr/lib/jvm/jdk1.7.0

export PATH=$PATH:/usr/lib/jvm/jdk1.7.0/bin
export JAVA_OPTS=“-Xms512m -Xmx1024m -XX:NewSize=256m -XX:MaxNewSize=356m -XX:PermSize=256m -XX:MaxPermSize=356m”

And below is the error message

root@hisp-Vostro-220s-Series:/home/hisp/dhis-live1111# java -jar dhis2-live.jar

  • INFO 17:14:02,864 Environment variable DHIS2_HOME: /home/hisp/dhis (TrayApp.java [main])

  • INFO 17:14:02,921 Initialising DHIS 2 Live… (TrayApp.java [main])

  • INFO 17:14:03,071 Loading DHIS 2 on port: 8082 (WebAppServer.java [main])
    2013-02-01 17:14:03.086:INFO::Logging to STDERR via org.mortbay.log.StdErrLog

  • INFO 17:14:03,124 Setting DHIS 2 web app context to: /home/hisp/dhis-live1111/webapps/dhis (WebAppServer.java [main])

  • INFO 17:14:03,125 Lifecycle: server starting (TrayApp.java [Thread-2])
    2013-02-01 17:14:03.178:INFO::jetty-6.1.x
    2013-02-01 17:14:03.587:INFO::NO JSP Support for /, did not find org.apache.jasper.servlet.JspServlet

2013-02-01 17:14:04.247:INFO:/:Initializing Spring root WebApplicationContext

  • INFO 17:14:12,505 System property dhis2.home points to /home/hisp/dhis-live1111/conf (DefaultLocationManager.java [Thread-2])

  • WARN 17:14:14,305 HHH000223: Recognized obsolete hibernate namespace http://hibernate.sourceforge.net/. Use namespace http://www.hibernate.org/dtd/ instead. Refer to Hibernate 3.6 Migration Guide! (DTDEntityResolver.java [Thread-2])

  • WARN 17:14:17,923 HHH000223: Recognized obsolete hibernate namespace http://hibernate.sourceforge.net/. Use namespace http://www.hibernate.org/dtd/ instead. Refer to Hibernate 3.6 Migration Guide! (DTDEntityResolver.java [Thread-2])

  • WARN 17:14:18,587 HHH000039: Composite-id class does not override hashCode(): org.hisp.dhis.detarget.DeTargetMember (RootClass.java [Thread-2])

  • WARN 17:14:18,602 HHH000038: Composite-id class does not override equals(): org.hisp.dhis.linelisting.LineListDataElementMap (RootClass.java [Thread-2])

  • WARN 17:14:18,603 HHH000039: Composite-id class does not override hashCode(): org.hisp.dhis.linelisting.LineListDataElementMap (RootClass.java [Thread-2])

  • WARN 17:14:18,606 HHH000038: Composite-id class does not override equals(): org.hisp.dhis.target.DeTargetMapping (RootClass.java [Thread-2])

  • WARN 17:14:18,607 HHH000039: Composite-id class does not override hashCode(): org.hisp.dhis.target.DeTargetMapping (RootClass.java [Thread-2])

  • WARN 17:14:23,897 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.smscommand.SMSCode]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:23,946 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.interpretation.Interpretation]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,022 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.smscommand.SMSCommand]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,164 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.period.RelativePeriods]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,246 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.program.ProgramExpression]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,252 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.interpretation.InterpretationComment]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,529 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.user.UserGroup.attributeValues]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,543 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.dataelement.DataElementGroup.attributeValues]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,571 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.patientreport.PatientTabularReport.organisationUnits]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,575 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.user.User.groups]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,583 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.organisationunit.OrganisationUnitGroup.attributeValues]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,585 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.smscommand.SMSCommand.codes]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:14:24,588 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.indicator.IndicatorGroup.attributeValues]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • ERROR 17:14:27,489 HHH000388: Unsuccessful: alter table report add column relativeperiodsid integer unique (SchemaUpdate.java [Thread-2])

  • ERROR 17:14:27,490 Syntax error in SQL statement "ALTER TABLE REPORT ADD COLUMN RELATIVEPERIODSID INTEGER UNIQUE[*] "; SQL statement:

alter table report add column relativeperiodsid integer unique [42000-166] (SchemaUpdate.java [Thread-2])

  • ERROR 17:14:27,493 HHH000388: Unsuccessful: alter table dataelementcategoryoption add constraint fk_dataelementcategory_conceptid foreign key (conceptid) references concept (SchemaUpdate.java [Thread-2])

  • ERROR 17:14:27,494 Constraint “FK_DATAELEMENTCATEGORY_CONCEPTID” already exists; SQL statement:
    alter table dataelementcategoryoption add constraint fk_dataelementcategory_conceptid foreign key (conceptid) references concept [90045-166] (SchemaUpdate.java [Thread-2])

  • ERROR 17:14:27,497 HHH000388: Unsuccessful: alter table interpretationcomment add constraint fk_interpretation_userid foreign key (userid) references userinfo (SchemaUpdate.java [Thread-2])

  • ERROR 17:14:27,498 Constraint “FK_INTERPRETATION_USERID” already exists; SQL statement:

alter table interpretationcomment add constraint fk_interpretation_userid foreign key (userid) references userinfo [90045-166] (SchemaUpdate.java [Thread-2])

  • ERROR 17:14:27,501 HHH000388: Unsuccessful: alter table report add constraint fk_report_relativeperiodsid foreign key (relativeperiodsid) references relativeperiods (SchemaUpdate.java [Thread-2])

  • ERROR 17:14:27,502 Column “RELATIVEPERIODSID” not found; SQL statement:
    alter table report add constraint fk_report_relativeperiodsid foreign key (relativeperiodsid) references relativeperiods [42122-166] (SchemaUpdate.java [Thread-2])

  • INFO 17:14:40,343 Found the following message senders: [org.hisp.dhis.message.EmailMessageSender@3bd6c2c6] (DefaultMessageService.java [Thread-2])

  • INFO 17:14:56,823 Camel context started (DHIS2LifecycleStrategy.java [Thread-2])

  • INFO 17:14:57,994 Executing startup routine [1 of 9, runlevel 1]: TableAlteror (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:14:58,616 Tables updated (TableAlteror.java [Thread-2])

  • INFO 17:14:58,617 Executing startup routine [2 of 9, runlevel 1]: MapViewUpgrader (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:14:58,640 Executing startup routine [3 of 9, runlevel 2]: IdentityPopulator (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:14:58,702 Executing startup routine [4 of 9, runlevel 2]: PeriodTypePopulator (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:14:58,732 Executing startup routine [5 of 9, runlevel 3]: TableCreator (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:14:58,808 Executing startup routine [6 of 9, runlevel 3]: DataElementDefaultDimensionPopulator (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:14:58,866 Linked default category with default concept (DataElementDefaultDimensionPopulator.java [Thread-2])

  • INFO 17:14:58,929 Executing startup routine [7 of 9, runlevel 4]: PatientTableAlteror (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:14:58,980 Executing startup routine [8 of 9, runlevel 5]: OrganisationUnitGroupSetPopulator (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:14:59,001 Executing startup routine [9 of 9, runlevel 5]: DataEntryFormUpgrader (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:14:59,004 Upgraded custom case entry form identifiers: 0 (DataEntryFormUpgrader.java [Thread-2])

  • INFO 17:14:59,009 All startup routines done (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO: EMAIL IMPORT SERVICE STARTED FOR STORE [imaps://hispdatabank@imap.gmail.com] AT Fri Feb 01 17:14:59 IST 2013

  • INFO: EMAIL OPERATION FINISHED WITH TOTAL [ 0 ] ATTACHMENT IMPORTS.

2013-02-01 17:15:01.607:INFO:/:Initializing Spring FrameworkServlet ‘mobileServlet’
2013-02-01 17:15:01.772:INFO:/:Initializing Spring FrameworkServlet ‘webapiServlet’

2013-02-01 17:15:19.363:WARN::failed webapiServlet: java.lang.OutOfMemoryError: PermGen space
2013-02-01 17:15:19.364:WARN::failed org.mortbay.jetty.webapp.WebAppContext@d5bf22f{/,/home/hisp/dhis-live1111/webapps/dhis}: java.lang.OutOfMemoryError: PermGen space

2013-02-01 17:15:19.364:WARN::Error starting handlers
java.lang.OutOfMemoryError: PermGen space
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:791)

at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
at java.net.URLClassLoader.defineClass(URLClassLoader.java:449)
at java.net.URLClassLoader.access$100(URLClassLoader.java:71)

at java.net.URLClassLoader$1.run(URLClassLoader.java:361)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)

at java.lang.ClassLoader.loadClass(ClassLoader.java:423)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:308)
at java.lang.ClassLoader.loadClass(ClassLoader.java:356)
at org.apache.log4j.spi.LoggingEvent.<init>(LoggingEvent.java:154)

at org.apache.log4j.Category.forcedLog(Category.java:388)
at org.apache.log4j.Category.log(Category.java:853)
at org.apache.commons.logging.impl.Log4JLogger.error(Log4JLogger.java:251)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroyBean(DefaultSingletonBeanRegistry.java:501)

at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingleton(DefaultSingletonBeanRegistry.java:474)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingletons(DefaultSingletonBeanRegistry.java:442)

at org.springframework.context.support.AbstractApplicationContext.destroyBeans(AbstractApplicationContext.java:1066)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:472)

at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:631)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:588)

at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:645)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:508)

at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:449)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:133)
at javax.servlet.GenericServlet.init(GenericServlet.java:241)

at org.mortbay.jetty.servlet.ServletHolder.initServlet(ServletHolder.java:440)
at org.mortbay.jetty.servlet.ServletHolder.doStart(ServletHolder.java:263)
at org.mortbay.component.AbstractLifeCycle.start(AbstractLifeCycle.java:50)

at org.mortbay.jetty.servlet.ServletHandler.initialize(ServletHandler.java:685)

2013-02-01 17:15:20.728:WARN::failed org.mortbay.jetty.nio.SelectChannelConnector$1@21f757ee: java.lang.OutOfMemoryError: PermGen space

2013-02-01 17:15:20.728:WARN::failed SelectChannelConnector@0.0.0.0:8082: java.lang.OutOfMemoryError: PermGen space
2013-02-01 17:15:20.728:WARN::failed Server@75addbad: java.lang.OutOfMemoryError: PermGen space

  • WARN 17:15:25,409 Lifecycle: server failed (TrayApp.java [Thread-2])
    Exception in thread “Thread-2”
    Exception: java.lang.OutOfMemoryError thrown from the UncaughtExceptionHandler in thread “Thread-2”

Exception in thread “org.springframework.scheduling.quartz.SchedulerFactoryBean#1_Worker-2”
Exception: java.lang.OutOfMemoryError thrown from the UncaughtExceptionHandler in thread “org.springframework.scheduling.quartz.SchedulerFactoryBean#1_Worker-2”

^C^C^C^C^C^C

Java HotSpot™ 64-Bit Server VM warning: Exception java.lang.OutOfMemoryError occurred dispatching signal SIGINT to handler- the VM may need to be forcibly terminated
Killed
root@hisp-Vostro-220s-Series:/home/hisp/dhis-live1111#

root@hisp-Vostro-220s-Series:/home/hisp/dhis-live1111#
root@hisp-Vostro-220s-Series:/home/hisp/dhis-live1111#
root@hisp-Vostro-220s-Series:/home/hisp/dhis-live1111# java -jar dhis2-live.jar

  • INFO 17:17:46,320 Environment variable DHIS2_HOME: /home/hisp/dhis (TrayApp.java [main])

  • INFO 17:17:46,387 Initialising DHIS 2 Live… (TrayApp.java [main])

  • INFO 17:17:46,542 Loading DHIS 2 on port: 8082 (WebAppServer.java [main])
    2013-02-01 17:17:46.556:INFO::Logging to STDERR via org.mortbay.log.StdErrLog

  • INFO 17:17:46,592 Setting DHIS 2 web app context to: /home/hisp/dhis-live1111/webapps/dhis (WebAppServer.java [main])

  • INFO 17:17:46,593 Lifecycle: server starting (TrayApp.java [Thread-2])
    2013-02-01 17:17:46.648:INFO::jetty-6.1.x

2013-02-01 17:17:47.065:INFO::NO JSP Support for /, did not find org.apache.jasper.servlet.JspServlet
2013-02-01 17:17:47.752:INFO:/:Initializing Spring root WebApplicationContext

  • INFO 17:17:55,887 System property dhis2.home points to /home/hisp/dhis-live1111/conf (DefaultLocationManager.java [Thread-2])

  • WARN 17:17:57,588 HHH000223: Recognized obsolete hibernate namespace http://hibernate.sourceforge.net/. Use namespace http://www.hibernate.org/dtd/ instead. Refer to Hibernate 3.6 Migration Guide! (DTDEntityResolver.java [Thread-2])

  • WARN 17:18:01,665 HHH000223: Recognized obsolete hibernate namespace http://hibernate.sourceforge.net/. Use namespace http://www.hibernate.org/dtd/ instead. Refer to Hibernate 3.6 Migration Guide! (DTDEntityResolver.java [Thread-2])

  • WARN 17:18:02,241 HHH000039: Composite-id class does not override hashCode(): org.hisp.dhis.detarget.DeTargetMember (RootClass.java [Thread-2])

  • WARN 17:18:02,256 HHH000038: Composite-id class does not override equals(): org.hisp.dhis.linelisting.LineListDataElementMap (RootClass.java [Thread-2])

  • WARN 17:18:02,256 HHH000039: Composite-id class does not override hashCode(): org.hisp.dhis.linelisting.LineListDataElementMap (RootClass.java [Thread-2])

  • WARN 17:18:02,259 HHH000038: Composite-id class does not override equals(): org.hisp.dhis.target.DeTargetMapping (RootClass.java [Thread-2])

  • WARN 17:18:02,260 HHH000039: Composite-id class does not override hashCode(): org.hisp.dhis.target.DeTargetMapping (RootClass.java [Thread-2])

  • WARN 17:18:07,563 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.smscommand.SMSCode]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:07,615 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.interpretation.Interpretation]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:07,689 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.smscommand.SMSCommand]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:07,839 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.period.RelativePeriods]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:07,925 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.program.ProgramExpression]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:07,931 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.interpretation.InterpretationComment]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:08,177 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.user.UserGroup.attributeValues]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:08,179 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.dataelement.DataElementGroup.attributeValues]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:08,193 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.patientreport.PatientTabularReport.organisationUnits]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:08,197 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.user.User.groups]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:08,199 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.organisationunit.OrganisationUnitGroup.attributeValues]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:08,201 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.smscommand.SMSCommand.codes]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • WARN 17:18:08,203 HHH020003: Could not find a specific ehcache configuration for cache named [org.hisp.dhis.indicator.IndicatorGroup.attributeValues]; using defaults. (AbstractEhcacheRegionFactory.java [Thread-2])

  • ERROR 17:18:10,851 HHH000388: Unsuccessful: alter table report add column relativeperiodsid integer unique (SchemaUpdate.java [Thread-2])

  • ERROR 17:18:10,854 Syntax error in SQL statement "ALTER TABLE REPORT ADD COLUMN RELATIVEPERIODSID INTEGER UNIQUE[*] "; SQL statement:

alter table report add column relativeperiodsid integer unique [42000-166] (SchemaUpdate.java [Thread-2])

  • ERROR 17:18:10,866 HHH000388: Unsuccessful: alter table dataelementcategoryoption add constraint fk_dataelementcategory_conceptid foreign key (conceptid) references concept (SchemaUpdate.java [Thread-2])

  • ERROR 17:18:10,867 Constraint “FK_DATAELEMENTCATEGORY_CONCEPTID” already exists; SQL statement:
    alter table dataelementcategoryoption add constraint fk_dataelementcategory_conceptid foreign key (conceptid) references concept [90045-166] (SchemaUpdate.java [Thread-2])

  • ERROR 17:18:10,873 HHH000388: Unsuccessful: alter table interpretationcomment add constraint fk_interpretation_userid foreign key (userid) references userinfo (SchemaUpdate.java [Thread-2])

  • ERROR 17:18:10,895 Constraint “FK_INTERPRETATION_USERID” already exists; SQL statement:

alter table interpretationcomment add constraint fk_interpretation_userid foreign key (userid) references userinfo [90045-166] (SchemaUpdate.java [Thread-2])

  • ERROR 17:18:10,901 HHH000388: Unsuccessful: alter table report add constraint fk_report_relativeperiodsid foreign key (relativeperiodsid) references relativeperiods (SchemaUpdate.java [Thread-2])

  • ERROR 17:18:10,903 Column “RELATIVEPERIODSID” not found; SQL statement:
    alter table report add constraint fk_report_relativeperiodsid foreign key (relativeperiodsid) references relativeperiods [42122-166] (SchemaUpdate.java [Thread-2])

  • INFO 17:18:24,479 Found the following message senders: [org.hisp.dhis.message.EmailMessageSender@c1a9c72] (DefaultMessageService.java [Thread-2])

  • INFO 17:18:39,840 Camel context started (DHIS2LifecycleStrategy.java [Thread-2])

  • INFO 17:18:42,273 Executing startup routine [1 of 9, runlevel 1]: TableAlteror (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:18:42,783 Tables updated (TableAlteror.java [Thread-2])

  • INFO 17:18:42,784 Executing startup routine [2 of 9, runlevel 1]: MapViewUpgrader (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:18:42,802 Executing startup routine [3 of 9, runlevel 2]: IdentityPopulator (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:18:42,863 Executing startup routine [4 of 9, runlevel 2]: PeriodTypePopulator (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:18:42,920 Executing startup routine [5 of 9, runlevel 3]: TableCreator (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:18:42,996 Executing startup routine [6 of 9, runlevel 3]: DataElementDefaultDimensionPopulator (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:18:43,032 Linked default category with default concept (DataElementDefaultDimensionPopulator.java [Thread-2])

  • INFO 17:18:43,091 Executing startup routine [7 of 9, runlevel 4]: PatientTableAlteror (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:18:43,134 Executing startup routine [8 of 9, runlevel 5]: OrganisationUnitGroupSetPopulator (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:18:43,141 Executing startup routine [9 of 9, runlevel 5]: DataEntryFormUpgrader (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO 17:18:43,143 Upgraded custom case entry form identifiers: 0 (DataEntryFormUpgrader.java [Thread-2])

  • INFO 17:18:43,144 All startup routines done (DefaultStartupRoutineExecutor.java [Thread-2])

  • INFO: EMAIL IMPORT SERVICE STARTED FOR STORE [imaps://hispdatabank@imap.gmail.com] AT Fri Feb 01 17:18:45 IST 2013

  • INFO: EMAIL OPERATION FINISHED WITH TOTAL [ 0 ] ATTACHMENT IMPORTS.

2013-02-01 17:18:45.925:INFO:/:Initializing Spring FrameworkServlet ‘mobileServlet’
2013-02-01 17:18:46.056:INFO:/:Initializing Spring FrameworkServlet ‘webapiServlet’

2013-02-01 17:19:01.981:WARN::failed webapiServlet: java.lang.OutOfMemoryError: PermGen space
2013-02-01 17:19:01.981:WARN::failed org.mortbay.jetty.webapp.WebAppContext@f76cd45{/,/home/hisp/dhis-live1111/webapps/dhis}: java.lang.OutOfMemoryError: PermGen space

2013-02-01 17:19:01.981:WARN::Error starting handlers
java.lang.OutOfMemoryError: PermGen space
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:791)

at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
at java.net.URLClassLoader.defineClass(URLClassLoader.java:449)
at java.net.URLClassLoader.access$100(URLClassLoader.java:71)

at java.net.URLClassLoader$1.run(URLClassLoader.java:361)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)

at java.lang.ClassLoader.loadClass(ClassLoader.java:423)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:308)
at java.lang.ClassLoader.loadClass(ClassLoader.java:356)
at org.apache.log4j.spi.LoggingEvent.<init>(LoggingEvent.java:154)

at org.apache.log4j.Category.forcedLog(Category.java:388)
at org.apache.log4j.Category.log(Category.java:853)
at org.apache.commons.logging.impl.Log4JLogger.error(Log4JLogger.java:251)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroyBean(DefaultSingletonBeanRegistry.java:501)

at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingleton(DefaultSingletonBeanRegistry.java:474)
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.destroySingletons(DefaultSingletonBeanRegistry.java:442)

at org.springframework.context.support.AbstractApplicationContext.destroyBeans(AbstractApplicationContext.java:1066)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:472)

at org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:631)
at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:588)

at org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:645)
at org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:508)

at org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:449)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:133)
at javax.servlet.GenericServlet.init(GenericServlet.java:241)

at org.mortbay.jetty.servlet.ServletHolder.initServlet(ServletHolder.java:440)
at org.mortbay.jetty.servlet.ServletHolder.doStart(ServletHolder.java:263)
at org.mortbay.component.AbstractLifeCycle.start(AbstractLifeCycle.java:50)

at org.mortbay.jetty.servlet.ServletHandler.initialize(ServletHandler.java:685)

2013-02-01 17:19:03.396:WARN::failed org.mortbay.jetty.nio.SelectChannelConnector$1@35d5501d: java.lang.OutOfMemoryError: PermGen space

2013-02-01 17:19:03.396:WARN::failed SelectChannelConnector@0.0.0.0:8082: java.lang.OutOfMemoryError: PermGen space
2013-02-01 17:19:03.396:WARN::failed Server@477ebb87: java.lang.OutOfMemoryError: PermGen space

  • WARN 17:19:03,396 Lifecycle: server failed (TrayApp.java [Thread-2])
    Exception in thread “Thread-2”
    Exception: java.lang.OutOfMemoryError thrown from the UncaughtExceptionHandler in thread “Thread-2”

Exception in thread “org.springframework.scheduling.quartz.SchedulerFactoryBean#1_Worker-2”
Exception: java.lang.OutOfMemoryError thrown from the UncaughtExceptionHandler in thread “org.springframework.scheduling.quartz.SchedulerFactoryBean#1_Worker-2”

Exception in thread “AWT-XAWT”
Exception: java.lang.OutOfMemoryError thrown from the UncaughtExceptionHandler in thread “AWT-XAWT”
Exception in thread “org.springframework.scheduling.quartz.SchedulerFactoryBean#1_Worker-3”

Exception: java.lang.OutOfMemoryError thrown from the UncaughtExceptionHandler in thread “org.springframework.scheduling.quartz.SchedulerFactoryBean#1_Worker-3”

···

On Fri, Feb 1, 2013 at 5:07 PM, Bob Jolliffe bobjolliffe@gmail.com wrote:

On 1 February 2013 11:31, Saptarshi Purkayastha sunbiz@gmail.com wrote:

oops, my bad.

This is a bash script with function calls. You’ll need to work with it.

Exactly. Or just delete

get ready to catch errors

and
echo “Starting DHIS2 live …”

Trapping ctrl-c is only really interesting from command line anyway.

You’ll need to verify that the first line is indeed

#!/bin/bash

and the file has executable permissions

I think he must be executing it somehow like ‘sh startup.sh’ which is

maybe default on gui deskop shortcuts. This can probably be changed

when creating the shortcut.

Regards,

Saptarshi PURKAYASTHA

My Tech Blog: http://sunnytalkstech.blogspot.com

You Live by CHOICE, Not by CHANCE

On 1 February 2013 11:11, Bob Jolliffe bobjolliffe@gmail.com wrote:

Hi Neeraj

This strange error seems to indicate you don’t have a bash shell which

is odd, or if you do its not being used.

I see the error when I type ‘sh startup.sh’.

But when I explicitly type ‘bash startup.sh’ all is fine. Or even

just ‘./startup.sh’

Can you confirm how you are starting this script? Maybe you have a

shortcut which explicitly calls ‘sh’.

Also I would not suggest that dhis-live is the best option for running

on ubuntu server if this is meant to be for production use. It uses a

pre-canned set of JAVA_OPTS which you would more likely want to tune

to your environment.

Bob

On 1 February 2013 10:01, Neeraj Gupta neeraj.hisp@gmail.com wrote:

Lars,

Below is the content of startup.sh

#!/bin/bash

get ready to catch errors

trap ctrl-c INT

trap unexpected-exit ERR

function ctrl-c () {

echo

echo "============================================"

echo "Keyboard interrupt"

echo "DHIS2 live exited"

echo "============================================"

exit

}

function unexpected-exit () {

echo "============================================"

echo "DHIS2 live exited with an error"

echo "Make sure you have a java runtime in your path"

echo "============================================"

read -p "Press any key to exit"

}

echo “Starting DHIS2 live …”

java -jar dhis2-live.jar

DHIS2LIVE=dirname $0

#$JAVA_HOME/bin/

java -jar $DHIS2LIVE/dhis2-live.jar

echo “DHIS2 live exited normally”

On Fri, Feb 1, 2013 at 3:14 PM, Lars Helge Øverland

larshelge@gmail.com

wrote:

Hi Neeraj,

can you post the contents of the startup.sh script?

Lars

On Fri, Feb 1, 2013 at 11:26 AM, Neeraj Gupta neeraj.hisp@gmail.com

wrote:

Hi Devs,

I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am

unable to run it, when i am running startup.sh it is saying

trap: ERR: bad trap

/home/dhis-live/startup.sh: 7: Syntax error: “(” unexpected

Downloaded it from http://www.dhis2.org/downloads

Tried it on windows and it worked fine.

Does DHIS-Live work with Linux also or it works with windows only?

–

Thanks,

Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

–

Thanks,

Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

–
Thanks,
Neeraj Gupta

9

There are two problems here:

  1. The syntax to define a function. Can we check http://tldp.org/LDP/abs/html/functions.html

  2. The character “-” is really trick when define functions with.

I changed to this:
#!/bin/bash

get ready to catch errors

trap ctrl_c INT
trap unexpected_exit ERR

ctrl_c () {
echo
echo “============================================”

echo "Keyboard interrupt"
echo "DHIS2 live exited"
echo "============================================"
exit

}

unexpected_exit () {
echo “============================================”

echo "DHIS2 live exited with an error"
echo "Make sure you have a java runtime in your path"
echo "============================================"
read -p "Press any key to exit"

}
…

That works fine. Yes, it’s really strange that only these days this is reported!

Caveman

···

On Fri, Feb 1, 2013 at 3:14 PM, Lars Helge Øverland larshelge@gmail.com wrote:

Hi Neeraj,

can you post the contents of the startup.sh script?

Lars

On Fri, Feb 1, 2013 at 11:26 AM, Neeraj Gupta neeraj.hisp@gmail.com wrote:

Hi Devs,

I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am unable to run it, when i am running startup.sh it is saying

trap: ERR: bad trap
/home/dhis-live/startup.sh: 7: Syntax error: “(” unexpected

Downloaded it from http://www.dhis2.org/downloads

Tried it on windows and it worked fine.
Does DHIS-Live work with Linux also or it works with windows only?

–
Thanks,
Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

–
Thanks,
Neeraj Gupta

10

No I don't think so. The reference you give is Advanced Bash Scripting Guide.

The problem here is that the script is 100% fine bash script, but not
when you execute with /bin/sh. Which does have different conventions
around function names - and also doesn't seem to understand ERR. The
following is more portable:

#!/bin/sh

# get ready to catch keyboard interrupt
trap ctrl_c INT

ctrl_c () {
    echo
    echo "============================================"
    echo "Keyboard interrupt"
    echo "DHIS2 live exited"
    echo "============================================"
    exit
}

unexpected_exit () {
    echo "============================================"
    echo "DHIS2 live exited with an error"
    echo "Make sure you have a java runtime in your path"
    echo "============================================"
    read -p "Press enter to exit" ch
    exit
}

echo "Starting DHIS2 live ..."

DHIS2LIVE=`dirname $0`
java -jar $DHIS2LIVE/dhis2-live.jar || unexpected_exit
echo "DHIS2 live exited normally"

···

On 3 February 2013 07:20, Orvalho Augusto <orvaquim@gmail.com> wrote:

There are two problems here:

1. The syntax to define a function. Can we check
http://tldp.org/LDP/abs/html/functions.html

2. The character "-" is really trick when define functions with.

I changed to this:
#!/bin/bash

# get ready to catch errors
trap ctrl_c INT
trap unexpected_exit ERR

ctrl_c () {

    echo
    echo "============================================"
    echo "Keyboard interrupt"
    echo "DHIS2 live exited"
    echo "============================================"
    exit
}

unexpected_exit () {

    echo "============================================"
    echo "DHIS2 live exited with an error"
    echo "Make sure you have a java runtime in your path"
    echo "============================================"
    read -p "Press any key to exit"
}
...

That works fine. Yes, it's really strange that only these days this is
reported!

Caveman

On Fri, Feb 1, 2013 at 12:01 PM, Neeraj Gupta <neeraj.hisp@gmail.com> wrote:

Lars,

Below is the content of startup.sh

#!/bin/bash

# get ready to catch errors
trap ctrl-c INT
trap unexpected-exit ERR

function ctrl-c () {
    echo
    echo "============================================"
    echo "Keyboard interrupt"
    echo "DHIS2 live exited"
    echo "============================================"
    exit
}

function unexpected-exit () {
    echo "============================================"
    echo "DHIS2 live exited with an error"
    echo "Make sure you have a java runtime in your path"
    echo "============================================"
    read -p "Press any key to exit"
}

echo "Starting DHIS2 live ..."
# java -jar dhis2-live.jar
DHIS2LIVE=`dirname $0`
#$JAVA_HOME/bin/
java -jar $DHIS2LIVE/dhis2-live.jar
echo "DHIS2 live exited normally"

On Fri, Feb 1, 2013 at 3:14 PM, Lars Helge Øverland <larshelge@gmail.com> >> wrote:

Hi Neeraj,

can you post the contents of the startup.sh script?

Lars

On Fri, Feb 1, 2013 at 11:26 AM, Neeraj Gupta <neeraj.hisp@gmail.com> >>> wrote:

Hi Devs,

I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am
unable to run it, when i am running startup.sh it is saying
trap: ERR: bad trap
/home/dhis-live/startup.sh: 7: Syntax error: "(" unexpected

Downloaded it from Downloads - DHIS2

Tried it on windows and it worked fine.
Does DHIS-Live work with Linux also or it works with windows only?

--
Thanks,
Neeraj Gupta

_______________________________________________
Mailing list: DHIS 2 developers in Launchpad
Post to : dhis2-devs@lists.launchpad.net
Unsubscribe : DHIS 2 developers in Launchpad
More help : ListHelp - Launchpad Help

--
Thanks,
Neeraj Gupta

_______________________________________________
Mailing list: DHIS 2 developers in Launchpad
Post to : dhis2-devs@lists.launchpad.net
Unsubscribe : DHIS 2 developers in Launchpad
More help : ListHelp - Launchpad Help

_______________________________________________
Mailing list: DHIS 2 developers in Launchpad
Post to : dhis2-devs@lists.launchpad.net
Unsubscribe : DHIS 2 developers in Launchpad
More help : ListHelp - Launchpad Help

11

OK.

This version is fine.

Orvalho

···

On Sun, Feb 3, 2013 at 1:45 PM, Bob Jolliffe bobjolliffe@gmail.com wrote:

No I don’t think so. The reference you give is Advanced Bash Scripting Guide.

The problem here is that the script is 100% fine bash script, but not

when you execute with /bin/sh. Which does have different conventions

around function names - and also doesn’t seem to understand ERR. The

following is more portable:

#!/bin/sh

get ready to catch keyboard interrupt

trap ctrl_c INT

ctrl_c () {

echo

echo "============================================"

echo "Keyboard interrupt"

echo "DHIS2 live exited"

echo "============================================"

exit

}

unexpected_exit () {

echo "============================================"

echo "DHIS2 live exited with an error"

echo "Make sure you have a java runtime in your path"

echo "============================================"

read -p “Press enter to exit” ch
exit

}

echo “Starting DHIS2 live …”

DHIS2LIVE=dirname $0

java -jar $DHIS2LIVE/dhis2-live.jar || unexpected_exit
echo “DHIS2 live exited normally”

On 3 February 2013 07:20, Orvalho Augusto orvaquim@gmail.com wrote:

There are two problems here:

  1. The syntax to define a function. Can we check

http://tldp.org/LDP/abs/html/functions.html

  1. The character “-” is really trick when define functions with.

I changed to this:

#!/bin/bash

get ready to catch errors

trap ctrl_c INT

trap unexpected_exit ERR

ctrl_c () {

echo

echo "============================================"

echo "Keyboard interrupt"

echo "DHIS2 live exited"

echo "============================================"

exit

}

unexpected_exit () {

echo "============================================"

echo "DHIS2 live exited with an error"

echo "Make sure you have a java runtime in your path"

echo "============================================"

read -p "Press any key to exit"

}

…

That works fine. Yes, it’s really strange that only these days this is

reported!

Caveman

On Fri, Feb 1, 2013 at 12:01 PM, Neeraj Gupta neeraj.hisp@gmail.com wrote:

Lars,

Below is the content of startup.sh

#!/bin/bash

get ready to catch errors

trap ctrl-c INT

trap unexpected-exit ERR

function ctrl-c () {

echo

echo "============================================"

echo "Keyboard interrupt"

echo "DHIS2 live exited"

echo "============================================"

exit

}

function unexpected-exit () {

echo "============================================"

echo "DHIS2 live exited with an error"

echo "Make sure you have a java runtime in your path"

echo "============================================"

read -p "Press any key to exit"

}

echo “Starting DHIS2 live …”

java -jar dhis2-live.jar

DHIS2LIVE=dirname $0

#$JAVA_HOME/bin/

java -jar $DHIS2LIVE/dhis2-live.jar

echo “DHIS2 live exited normally”

On Fri, Feb 1, 2013 at 3:14 PM, Lars Helge Øverland larshelge@gmail.com > > >> wrote:

Hi Neeraj,

can you post the contents of the startup.sh script?

Lars

On Fri, Feb 1, 2013 at 11:26 AM, Neeraj Gupta neeraj.hisp@gmail.com > > >>> wrote:

Hi Devs,

I was trying to work with DHIS Live on Ubuntu Server 11.10 , but I am

unable to run it, when i am running startup.sh it is saying

trap: ERR: bad trap

/home/dhis-live/startup.sh: 7: Syntax error: “(” unexpected

Downloaded it from http://www.dhis2.org/downloads

Tried it on windows and it worked fine.

Does DHIS-Live work with Linux also or it works with windows only?

–

Thanks,

Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

–

Thanks,

Neeraj Gupta

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp

Mailing list: https://launchpad.net/~dhis2-devs

Post to : dhis2-devs@lists.launchpad.net

Unsubscribe : https://launchpad.net/~dhis2-devs

More help : https://help.launchpad.net/ListHelp