Also, please redirect this to the list:
dhis2-users@lists.launchpad.net
···
On Feb 20, 2018 2:46 PM, “Jalal” jabdulatef@immap.org wrote:
Dears ,
Please I need your support for the below issue :
I have a hosting on linode 2048 (My Ubuntu 16.04 LTS),and I’m trying to install DHIS2 through the below link:
https://docs.dhis2.org/2.28/en/implementer/html/install_server_setup.html
but I got the below error: advice please
There is insufficient memory for the Java Runtime Environment to continue.
Native memory allocation (mmap) failed to map 2796224512 bytes for committing reserved memory.
Possible reasons:
The system is out of physical RAM or swap space
In 32 bit mode, the process size limit was hit
Possible solutions:
Reduce memory load on the system
Increase physical memory or swap space
Check if swap backing store is full
Use 64 bit Java on a 64 bit OS
Decrease Java heap size (-Xmx/-Xms)
Decrease number of Java threads
Decrease Java thread stack sizes (-Xss)
Set larger code cache with -XX:ReservedCodeCacheSize=
This output file may be truncated or incomplete.
Out of Memory Error (os_linux.cpp:2640), pid=7874, tid=0x00007f5b42495700
JRE version: (8.0_161-b12) (build )
Java VM: Java HotSpot™ 64-Bit Server VM (25.161-b12 mixed mode linux-amd64 compressed oops)
Failed to write core dump. Core dumps have been disabled. To enable core dumping, try “ulimit -c unlimited” before starting Java again
--------------- T H R E A D ---------------
Current thread (0x00007f5b3c00a800): JavaThread “Unknown thread” [_thread_in_vm, id=7875, stack(0x00007f5b42395000,0x00007f5b42496000)]
Stack: [0x00007f5b42395000,0x00007f5b42496000], sp=0x00007f5b42494350, free space=1020k
Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code)
V [libjvm.so+0xacf94a] VMError::report_and_die()+0x2ba
V [libjvm.so+0x50050b] report_vm_out_of_memory(char const*, int, unsigned long, VMErrorType, char const*)+0x8b
V [libjvm.so+0x92b133] os:
:commit_memory_impl(char*, unsigned long, bool)+0x103
V [libjvm.so+0x92b5c9] os::pd_commit_memory(char*, unsigned long, unsigned long, bool)+0x29
V [libjvm.so+0x924c0a] os::commit_memory(char*, unsigned long, unsigned long, bool)+0x2a
V [libjvm.so+0xacb629] VirtualSpace::expand_by(unsigned long, bool)+0x199
V [libjvm.so+0xacc17e] VirtualSpace::initialize(ReservedSpace, unsigned long)+0xee
V [libjvm.so+0x5fec11] CardGeneration::CardGeneration(ReservedSpace, unsigned long, int, GenRemSet*)+0xf1
V [libjvm.so+0xa7225f] TenuredGeneration::TenuredGeneration(ReservedSpace, unsigned long, int, GenRemSet*)+0x5f
V [libjvm.so+0x5fff19] GenerationSpec::init(ReservedSpace, int, GenRemSet*)+0x339
V [libjvm.so+0x5eeaae] GenCollectedHeap::initialize()+0x1de
V [libjvm.so+0xa979f3] Universe::initialize_heap()+0xf3
V [libjvm.so+0xa97f5e] universe_init()+0x3e
V [libjvm.so+0x641fb5] init_globals()+0x65
V [libjvm.so+0xa7c5ae] Threads::create_vm(JavaVMInitArgs*, bool*)+0x23e
V [libjvm.so+0x6d6c24] JNI_CreateJavaVM+0x74
C [libjli.so+0x797e] JavaMain+0x9e
C [libpthread.so.0+0x76ba] start_thread+0xca
--------------- P R O C E S S ---------------
Java Threads: ( => current thread )
Other Threads:
=>0x00007f5b3c00a800 (exited) JavaThread “Unknown thread” [_thread_in_vm, id=7875, stack(0x00007f5b42395000,0x00007f5b42496000)]
VM state:not at safepoint (not fully initialized)
VM Mutex/Monitor currently owned by a thread: None
GC Heap History (0 events):
No events
Deoptimization events (0 events):
No events
Classes redefined (0 events):
No events
Internal exceptions (0 events):
No events
Events (0 events):
No events
Dynamic libraries:
00400000-00401000 r-xp 00000000 08:00 252076 /usr/lib/jvm/java-8-oracle/bin/java
00600000-00601000 rw-p 00000000 08:00 252076 /usr/lib/jvm/java-8-oracle/bin/java
021e2000-02203000 rw-p 00000000 00:00 0 [heap]
5eb400000-63e950000 rw-p 00000000 00:00 0
63e950000-687800000 —p 00000000 00:00 0
72e2b0000-7c0000000 —p 00000000 00:00 0
7f5b2af79000-7f5b2b3ac000 rw-p 00000000 00:00 0
7f5b2b3ac000-7f5b2bfb7000 —p 00000000 00:00 0
7f5b2bfb7000-7f5b2bfc2000 rw-p 00000000 00:00 0
7f5b2bfc2000-7f5b2c378000 —p 00000000 00:00 0
7f5b2c378000-7f5b2c5e8000 rwxp 00000000 00:00 0
7f5b2c5e8000-7f5b3b378000 —p 00000000 00:00 0
7f5b3b378000-7f5b3b393000 r-xp 00000000 08:00 253822 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libzip.so
7f5b3b393000-7f5b3b593000 —p 0001b000 08:00 253822 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libzip.so
7f5b3b593000-7f5b3b594000 rw-p 0001b000 08:00 253822 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libzip.so
7f5b3b594000-7f5b3b59f000 r-xp 00000000 08:00 6186 /lib/x86_64-linux-gnu/libnss_files-2.23.so
7f5b3b59f000-7f5b3b79e000 —p 0000b000 08:00 6186 /lib/x86_64-linux-gnu/libnss_files-2.23.so
7f5b3b79e000-7f5b3b79f000 r–p 0000a000 08:00 6186 /lib/x86_64-linux-gnu/libnss_files-2.23.so
7f5b3b79f000-7f5b3b7a0000 rw-p 0000b000 08:00 6186 /lib/x86_64-linux-gnu/libnss_files-2.23.so
7f5b3b7a0000-7f5b3b7a6000 rw-p 00000000 00:00 0
7f5b3b7a6000-7f5b3b7b1000 r-xp 00000000 08:00 6554 /lib/x86_64-linux-gnu/libnss_nis-2.23.so
7f5b3b7b1000-7f5b3b9b0000 —p 0000b000 08:00 6554 /lib/x86_64-linux-gnu/libnss_nis-2.23.so
7f5b3b9b0000-7f5b3b9b1000 r–p 0000a000 08:00 6554 /lib/x86_64-linux-gnu/libnss_nis-2.23.so
7f5b3b9b1000-7f5b3b9b2000 rw-p 0000b000 08:00 6554 /lib/x86_64-linux-gnu/libnss_nis-2.23.so
7f5b3b9b2000-7f5b3b9c8000 r-xp 00000000 08:00 4264 /lib/x86_64-linux-gnu/libnsl-2.23.so
7f5b3b9c8000-7f5b3bbc7000 —p 00016000 08:00 4264 /lib/x86_64-linux-gnu/libnsl-2.23.so
7f5b3bbc7000-7f5b3bbc8000 r–p 00015000 08:00 4264 /lib/x86_64-linux-gnu/libnsl-2.23.so
7f5b3bbc8000-7f5b3bbc9000 rw-p 00016000 08:00 4264 /lib/x86_64-linux-gnu/libnsl-2.23.so
7f5b3bbc9000-7f5b3bbcb000 rw-p 00000000 00:00 0
7f5b3bbcb000-7f5b3bbd3000 r-xp 00000000 08:00 6114 /lib/x86_64-linux-gnu/libnss_compat-2.23.so
7f5b3bbd3000-7f5b3bdd2000 —p 00008000 08:00 6114 /lib/x86_64-linux-gnu/libnss_compat-2.23.so
7f5b3bdd2000-7f5b3bdd3000 r–p 00007000 08:00 6114 /lib/x86_64-linux-gnu/libnss_compat-2.23.so
7f5b3bdd3000-7f5b3bdd4000 rw-p 00008000 08:00 6114 /lib/x86_64-linux-gnu/libnss_compat-2.23.so
7f5b3bdd4000-7f5b3bdff000 r-xp 00000000 08:00 253816 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libjava.so
7f5b3bdff000-7f5b3bffe000 —p 0002b000 08:00 253816 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libjava.so
7f5b3bffe000-7f5b3c000000 rw-p 0002a000 08:00 253816 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libjava.so
7f5b3c000000-7f5b3c037000 rw-p 00000000 00:00 0
7f5b3c037000-7f5b40000000 —p 00000000 00:00 0
7f5b40074000-7f5b40164000 rw-p 00000000 00:00 0
7f5b40164000-7f5b40171000 r-xp 00000000 08:00 253821 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libverify.so
7f5b40171000-7f5b40371000 —p 0000d000 08:00 253821 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libverify.so
7f5b40371000-7f5b40373000 rw-p 0000d000 08:00 253821 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/libverify.so
7f5b40373000-7f5b4037a000 r-xp 00000000 08:00 6555 /lib/x86_64-linux-gnu/librt-2.23.so
7f5b4037a000-7f5b40579000 —p 00007000 08:00 6555 /lib/x86_64-linux-gnu/librt-2.23.so
7f5b40579000-7f5b4057a000 r–p 00006000 08:00 6555 /lib/x86_64-linux-gnu/librt-2.23.so
7f5b4057a000-7f5b4057b000 rw-p 00007000 08:00 6555 /lib/x86_64-linux-gnu/librt-2.23.so
7f5b4057b000-7f5b40683000 r-xp 00000000 08:00 4262 /lib/x86_64-linux-gnu/libm-2.23.so
7f5b40683000-7f5b40882000 —p 00108000 08:00 4262 /lib/x86_64-linux-gnu/libm-2.23.so
7f5b40882000-7f5b40883000 r–p 00107000 08:00 4262 /lib/x86_64-linux-gnu/libm-2.23.so
7f5b40883000-7f5b40884000 rw-p 00108000 08:00 4262 /lib/x86_64-linux-gnu/libm-2.23.so
7f5b40884000-7f5b4155d000 r-xp 00000000 08:00 253799 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/server/libjvm.so
7f5b4155d000-7f5b4175c000 —p 00cd9000 08:00 253799 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/server/libjvm.so
7f5b4175c000-7f5b41835000 rw-p 00cd8000 08:00 253799 /usr/lib/jvm/java-8-oracle/jre/lib/amd64/server/libjvm.so
7f5b41835000-7f5b41881000 rw-p 00000000 00:00 0
7f5b41881000-7f5b41a41000 r-xp 00000000 08:00 4286 /lib/x86_64-linux-gnu/libc-2.23.so
7f5b41a41000-7f5b41c41000 —p 001c0000 08:00 4286 /lib/x86_64-linux-gnu/libc-2.23.so
7f5b41c41000-7f5b41c45000 r–p 001c0000 08:00 4286 /lib/x86_64-linux-gnu/libc-2.23.so
7f5b41c45000-7f5b41c47000 rw-p 001c4000 08:00 4286 /lib/x86_64-linux-gnu/libc-2.23.so
7f5b41c47000-7f5b41c4b000 rw-p 00000000 00:00 0
7f5b41c4b000-7f5b41c4e000 r-xp 00000000 08:00 4289 /lib/x86_64-linux-gnu/libdl-2.23.so
7f5b41c4e000-7f5b41e4d000 —p 00003000 08:00 4289 /lib/x86_64-linux-gnu/libdl-2.23.so
7f5b41e4d000-7f5b41e4e000 r–p 00002000 08:00 4289 /lib/x86_64-linux-gnu/libdl-2.23.so
7f5b41e4e000-7f5b41e4f000 rw-p 00003000 08:00 4289 /lib/x86_64-linux-gnu/libdl-2.23.so
7f5b41e4f000-7f5b41e65000 r-xp 00000000 08:00 253437 /usr/lib/jvm/java-8-oracle/lib/amd64/jli/libjli.so
7f5b41e65000-7f5b42064000 —p 00016000 08:00 253437 /usr/lib/jvm/java-8-oracle/lib/amd64/jli/libjli.so
7f5b42064000-7f5b42065000 rw-p 00015000 08:00 253437 /usr/lib/jvm/java-8-oracle/lib/amd64/jli/libjli.so
7f5b42065000-7f5b4207d000 r-xp 00000000 08:00 4284 /lib/x86_64-linux-gnu/libpthread-2.23.so
7f5b4207d000-7f5b4227c000 —p 00018000 08:00 4284 /lib/x86_64-linux-gnu/libpthread-2.23.so
7f5b4227c000-7f5b4227d000 r–p 00017000 08:00 4284 /lib/x86_64-linux-gnu/libpthread-2.23.so
7f5b4227d000-7f5b4227e000 rw-p 00018000 08:00 4284 /lib/x86_64-linux-gnu/libpthread-2.23.so
7f5b4227e000-7f5b42282000 rw-p 00000000 00:00 0
7f5b42282000-7f5b422a8000 r-xp 00000000 08:00 4268 /lib/x86_64-linux-gnu/ld-2.23.so
7f5b42395000-7f5b42398000 —p 00000000 00:00 0
7f5b42398000-7f5b4249b000 rw-p 00000000 00:00 0
7f5b4249d000-7f5b424a5000 rw-s 00000000 08:00 131302 /tmp/hsperfdata_dhis/7874
7f5b424a5000-7f5b424a6000 rw-p 00000000 00:00 0
7f5b424a6000-7f5b424a7000 r–p 00000000 00:00 0
7f5b424a7000-7f5b424a8000 r–p 00025000 08:00 4268 /lib/x86_64-linux-gnu/ld-2.23.so
7f5b424a8000-7f5b424a9000 rw-p 00026000 08:00 4268 /lib/x86_64-linux-gnu/ld-2.23.so
7f5b424a9000-7f5b424aa000 rw-p 00000000 00:00 0
7ffedea4e000-7ffedea6f000 rw-p 00000000 00:00 0 [stack]
7ffedeaea000-7ffedeaed000 r–p 00000000 00:00 0 [vvar]
7ffedeaed000-7ffedeaef000 r-xp 00000000 00:00 0 [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0 [vsyscall]
VM Arguments:
jvm_args: -Djava.util.logging.config.file=/home/dhis/tomcat-dhis/conf/logging.properties -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager -Xmx7500m -Xms4000m -Djava.endorsed.dirs=/usr/share/tomcat7/endorsed -Dcatalina.base=/home/dhis/tomcat-dhis -Dcatalina.home=/usr/share/tomcat7 -Djava.io.tmpdir=/home/dhis/tomcat-dhis/temp
java_command: org.apache.catalina.startup.Bootstrap start
java_class_path (initial): /usr/share/tomcat7/bin/bootstrap.jar:/usr/share/tomcat7/bin/tomcat-juli.jar
Launcher Type: SUN_STANDARD
Environment Variables:
JAVA_HOME=/usr/lib/jvm/java-8-oracle/
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/snap/bin
USERNAME=dhis
SHELL=/bin/bash
Signal Handlers:
SIGSEGV: [libjvm.so+0xad01e0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGBUS: [libjvm.so+0xad01e0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGFPE: [libjvm.so+0x927fb0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGPIPE: [libjvm.so+0x927fb0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGXFSZ: [libjvm.so+0x927fb0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGILL: [libjvm.so+0x927fb0], sa_mask[0]=11111111011111111101111111111110, sa_flags=SA_RESTART|SA_SIGINFO
SIGUSR1: SIG_DFL, sa_mask[0]=00000000000000000000000000000000, sa_flags=none
SIGUSR2: [libjvm.so+0x9297f0], sa_mask[0]=00000000000000000000000000000000, sa_flags=SA_RESTART|SA_SIGINFO
SIGHUP: SIG_DFL, sa_mask[0]=00000000000000000000000000000000, sa_flags=none
SIGINT: SIG_IGN, sa_mask[0]=00000000000000000000000000000000, sa_flags=none
SIGTERM: SIG_DFL, sa_mask[0]=00000000000000000000000000000000, sa_flags=none
SIGQUIT: SIG_IGN, sa_mask[0]=00000000000000000000000000000000, sa_flags=none
--------------- S Y S T E M ---------------
OS:DISTRIB_ID=Ubuntu
DISTRIB_RELEASE=16.04
DISTRIB_CODENAME=xenial
DISTRIB_DESCRIPTION=“Ubuntu 16.04.3 LTS”
uname:Linux 4.14.17-x86_64-linode99 #1 SMP Tue Feb 6 19:09:58 UTC 2018 x86_64
libc:glibc 2.23 NPTL 2.23
rlimit: STACK 8192k, CORE 0k, NPROC 7929, NOFILE 1048576, AS infinity
load average:0.00 0.00 0.00
/proc/meminfo:
MemTotal: 2035604 kB
MemFree: 24152 kB
MemAvailable: 1236104 kB
Buffers: 31928 kB
Cached: 1174788 kB
SwapCached: 0 kB
Active: 845296 kB
Inactive: 1021688 kB
Active(anon): 661804 kB
Inactive(anon): 17328 kB
Active(file): 183492 kB
Inactive(file): 1004360 kB
Unevictable: 0 kB
Mlocked: 0 kB
SwapTotal: 1048572 kB
SwapFree: 1048572 kB
Dirty: 60 kB
Writeback: 0 kB
AnonPages: 660328 kB
Mapped: 64884 kB
Shmem: 18804 kB
Slab: 78460 kB
SReclaimable: 57136 kB
SUnreclaim: 21324 kB
KernelStack: 2520 kB
PageTables: 7460 kB
NFS_Unstable: 0 kB
Bounce: 0 kB
WritebackTmp: 0 kB
CommitLimit: 2066372 kB
Committed_AS: 6318628 kB
VmallocTotal: 34359738367 kB
VmallocUsed: 0 kB
VmallocChunk: 0 kB
DirectMap4k: 26488 kB
DirectMap2M: 2070528 kB
DirectMap1G: 0 kB
CPU:total 1 (initial active 1) (1 cores per cpu, 1 threads per core) family 6 model 63 stepping 2, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3, sse4.1, sse4.2, popcnt, avx, avx2, aes, clmul, erms, lzcnt, tsc, bmi1, bmi2
/proc/cpuinfo:
processor : 0
vendor_id : GenuineIntel
cpu family : 6
model : 63
model name : Intel(R) Xeon(R) CPU E5-2680 v3 @ 2.50GHz
stepping : 2
microcode : 0x1
cpu MHz : 2499.996
cache size : 16384 KB
physical id : 0
siblings : 1
core id : 0
cpu cores : 1
apicid : 0
initial apicid : 0
fpu : yes
fpu_exception : yes
cpuid level : 13
wp : yes
flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon rep_good nopl xtopology cpuid pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm cpuid_fault invpcid_single pti retpoline fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid xsaveopt arat
bugs : cpu_meltdown spectre_v1 spectre_v2
bogomips : 5001.32
clflush size : 64
cache_alignment : 64
address sizes : 40 bits physical, 48 bits virtual
power management:
Memory: 4k page, physical 2035604k(24152k free), swap 1048572k(1048572k free)
vm_info: Java HotSpot™ 64-Bit Server VM (25.161-b12) for linux-amd64 JRE (1.8.0_161-b12), built on Dec 19 2017 16:12:43 by “java_re” with gcc 4.3.0 20080428 (Red Hat 4.3.0-8)
time: Tue Feb 20 22:08:29 2018
elapsed time: 0 seconds (0d 0h 0m 0s)
=======================================================================================
dhis@dhis2_host:~$ tail -f tomcat-dhis/logs/catalina.out
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Feb 20, 2018 10:24:22 PM org.apache.catalina.startup.HostConfig deployWAR
INFO: Deployment of web application archive /home/dhis/tomcat-dhis/webapps/ROOT.war has finished in 1,251 ms
Feb 20, 2018 10:24:22 PM org.apache.coyote.AbstractProtocol start
INFO: Starting ProtocolHandler [“http-bio-8080”]
Feb 20, 2018 10:24:22 PM org.apache.catalina.startup.Catalina start
INFO: Server startup in 1418 ms
============================================
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